Nextflow workflow report

Workflow execution completed unsuccessfully!

The exit status of the task that caused the workflow execution to fail was: 1.

The full error message was:

Error executing process > 'NFCORE_FETCHNGS:SRA:ASPERA_CLI (ERX1188904_ERR1109373)'

Caused by:
  Process `NFCORE_FETCHNGS:SRA:ASPERA_CLI (ERX1188904_ERR1109373)` terminated with an error exit status (1)


Command executed:

  ascp \
      -QT -l 300m -P33001 \
      -i $CONDA_PREFIX/etc/aspera/aspera_bypass_dsa.pem \
      era-fasp@fasp.sra.ebi.ac.uk:/vol1/fastq/ERR110/003/ERR1109373/ERR1109373.fastq.gz \
      ERX1188904_ERR1109373_1.fastq.gz
  
  echo "9fd57225d6c07a31843276d6df9b15c0  ERX1188904_ERR1109373_1.fastq.gz" > ERX1188904_ERR1109373_1.fastq.gz.md5
  md5sum -c ERX1188904_ERR1109373_1.fastq.gz.md5
  
  ascp \
      -QT -l 300m -P33001 \
      -i $CONDA_PREFIX/etc/aspera/aspera_bypass_dsa.pem \
      era-fasp@fasp.sra.ebi.ac.uk:/vol1/fastq/ERR110/003/ERR1109373/ERR1109373_1.fastq.gz \
      ERX1188904_ERR1109373_2.fastq.gz
  
  echo "5a62e8f785687dce890cfb4fe3e607f9  ERX1188904_ERR1109373_2.fastq.gz" > ERX1188904_ERR1109373_2.fastq.gz.md5
  md5sum -c ERX1188904_ERR1109373_2.fastq.gz.md5
  
  cat <<-END_VERSIONS > versions.yml
  "NFCORE_FETCHNGS:SRA:ASPERA_CLI":
      aspera_cli: $(ascli --version)
  END_VERSIONS

Command exit status:
  1

Command output:
  Completed: 3K bytes transferred in 0 seconds
   (47K bits/sec), in 1 file.
  ERX1188904_ERR1109373_1.fastq.gz: FAILED

Command error:
  Unable to find image 'quay.io/biocontainers/aspera-cli:4.14.0--hdfd78af_1' locally
  4.14.0--hdfd78af_1: Pulling from biocontainers/aspera-cli
  642efca944a0: Pulling fs layer
  bd9ddc54bea9: Pulling fs layer
  7b8e1e5ce0be: Pulling fs layer
  bd9ddc54bea9: Verifying Checksum
  bd9ddc54bea9: Download complete
  642efca944a0: Download complete
  642efca944a0: Pull complete
  bd9ddc54bea9: Pull complete
  7b8e1e5ce0be: Verifying Checksum
  7b8e1e5ce0be: Download complete
  7b8e1e5ce0be: Pull complete
  Digest: sha256:07678dfe3a66d095861841dd147739d0acdfe4b96fca339d68acb3050f12aac2
  Status: Downloaded newer image for quay.io/biocontainers/aspera-cli:4.14.0--hdfd78af_1
  Completed: 3K bytes transferred in 0 seconds
   (47K bits/sec), in 1 file.
  ERX1188904_ERR1109373_1.fastq.gz: FAILED
  md5sum: WARNING: 1 of 1 computed checksums did NOT match

Work dir:
  /workspace/fetchngs/work/c5/4f02c6059fffd4648f62745f74f42c

Tip: view the complete command output by changing to the process work dir and entering the command `cat .command.out`